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surescan high-resolution dna microarray scanner  (Agilent technologies)


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    Structured Review

    Agilent technologies surescan high-resolution dna microarray scanner
    Flow chart of <t>microarray</t> data analysis. The agilent single color microarray platform was used having more than 58,000 transcripts and further data processing was done using agilent GeneSpring software followed by pathway analysis using GSEA database. Numbers in parentheses illustrates number of pathways enriched in each category using GSEA database. DEGs-Differentially expressed genes, ANOVA-Analysis of variance, BP-Biological pathway, CC-Cellular component, MF-Molecular function.
    Surescan High Resolution Dna Microarray Scanner, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/high-resolution+microarray+scanner/bio_rxiv__2024__06__24__600143-52-12-11
    Average 90 stars, based on 1 article reviews
    surescan high-resolution dna microarray scanner - by Bioz Stars, 2026-09
    90/100 stars

    Images

    1) Product Images from "Synovial fluid transcriptome dynamics in osteoarthritis progression: Implications in pathogenesis"

    Article Title: Synovial fluid transcriptome dynamics in osteoarthritis progression: Implications in pathogenesis

    Journal: bioRxiv

    doi: 10.1101/2024.06.24.600143

    Flow chart of microarray data analysis. The agilent single color microarray platform was used having more than 58,000 transcripts and further data processing was done using agilent GeneSpring software followed by pathway analysis using GSEA database. Numbers in parentheses illustrates number of pathways enriched in each category using GSEA database. DEGs-Differentially expressed genes, ANOVA-Analysis of variance, BP-Biological pathway, CC-Cellular component, MF-Molecular function.
    Figure Legend Snippet: Flow chart of microarray data analysis. The agilent single color microarray platform was used having more than 58,000 transcripts and further data processing was done using agilent GeneSpring software followed by pathway analysis using GSEA database. Numbers in parentheses illustrates number of pathways enriched in each category using GSEA database. DEGs-Differentially expressed genes, ANOVA-Analysis of variance, BP-Biological pathway, CC-Cellular component, MF-Molecular function.

    Techniques Used: Microarray, Software

    Related Articles

    Microarray:

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    Article Title: New miRNA Profiles Accurately Distinguish Renal Cell Carcinomas and Upper Tract Urothelial Carcinomas from the Normal Kidney
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    Article Title: Tumor versus Stromal Cells in Culture—Survival of the Fittest?
    Article Snippet: The slides were scanned at 3 resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted using Feature Extraction (Agilent Technologies).

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    Article Title: Single-Round Patterned DNA Library Microarray Aptamer Lead Identification
    Article Snippet: Microarray equipment consisted of the following: custom 8 × 15 k DNA microarrays, 8 × 15 k gasket slides, ozone barrier slides, hybridization chambers, scanner cassettes, hybridization oven, and High-resolution Microarray Scanner (all Agilent) and slide rack and wash dishes (Shandon) and Kimtech polypropylene wipes (Kimberly-Clark).

    Article Title: Increased mitochondrial activity in a novel IDH1-R132H mutant human oligodendroglioma xenograft model: in situ detection of 2-HG and α-KG
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    Article Title: Kar4 is required for the normal pattern of meiotic gene expression.
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    Expressing:

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: New miRNA Profiles Accurately Distinguish Renal Cell Carcinomas and Upper Tract Urothelial Carcinomas from the Normal Kidney
    Article Snippet: After hybridization, the microarray slides were scanned at 10 μm using the High-Resolution Microarray Scanner (Agilent Technologies) and stored in an ozone free environment.

    Article Title: Tumor versus Stromal Cells in Culture—Survival of the Fittest?
    Article Snippet: The slides were scanned at 3 resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted using Feature Extraction (Agilent Technologies).

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations
    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Article Title: Single-Round Patterned DNA Library Microarray Aptamer Lead Identification
    Article Snippet: Microarray equipment consisted of the following: custom 8 × 15 k DNA microarrays, 8 × 15 k gasket slides, ozone barrier slides, hybridization chambers, scanner cassettes, hybridization oven, and High-resolution Microarray Scanner (all Agilent) and slide rack and wash dishes (Shandon) and Kimtech polypropylene wipes (Kimberly-Clark).

    Article Title: Increased mitochondrial activity in a novel IDH1-R132H mutant human oligodendroglioma xenograft model: in situ detection of 2-HG and α-KG
    Article Snippet: The slides were scanned at 3 μm resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted with Feature Extraction software (Agilent Technologies).

    Article Title: Kar4 is required for the normal pattern of meiotic gene expression.
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Construct:

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: New miRNA Profiles Accurately Distinguish Renal Cell Carcinomas and Upper Tract Urothelial Carcinomas from the Normal Kidney
    Article Snippet: After hybridization, the microarray slides were scanned at 10 μm using the High-Resolution Microarray Scanner (Agilent Technologies) and stored in an ozone free environment.

    Article Title: Tumor versus Stromal Cells in Culture—Survival of the Fittest?
    Article Snippet: The slides were scanned at 3 resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted using Feature Extraction (Agilent Technologies).

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations
    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Article Title: Single-Round Patterned DNA Library Microarray Aptamer Lead Identification
    Article Snippet: Microarray equipment consisted of the following: custom 8 × 15 k DNA microarrays, 8 × 15 k gasket slides, ozone barrier slides, hybridization chambers, scanner cassettes, hybridization oven, and High-resolution Microarray Scanner (all Agilent) and slide rack and wash dishes (Shandon) and Kimtech polypropylene wipes (Kimberly-Clark).

    Article Title: Increased mitochondrial activity in a novel IDH1-R132H mutant human oligodendroglioma xenograft model: in situ detection of 2-HG and α-KG
    Article Snippet: The slides were scanned at 3 μm resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted with Feature Extraction software (Agilent Technologies).

    Article Title: Kar4 is required for the normal pattern of meiotic gene expression.
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    RNA Sequencing Assay:

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: New miRNA Profiles Accurately Distinguish Renal Cell Carcinomas and Upper Tract Urothelial Carcinomas from the Normal Kidney
    Article Snippet: After hybridization, the microarray slides were scanned at 10 μm using the High-Resolution Microarray Scanner (Agilent Technologies) and stored in an ozone free environment.

    Article Title: Tumor versus Stromal Cells in Culture—Survival of the Fittest?
    Article Snippet: The slides were scanned at 3 resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted using Feature Extraction (Agilent Technologies).

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations
    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Article Title: Single-Round Patterned DNA Library Microarray Aptamer Lead Identification
    Article Snippet: Microarray equipment consisted of the following: custom 8 × 15 k DNA microarrays, 8 × 15 k gasket slides, ozone barrier slides, hybridization chambers, scanner cassettes, hybridization oven, and High-resolution Microarray Scanner (all Agilent) and slide rack and wash dishes (Shandon) and Kimtech polypropylene wipes (Kimberly-Clark).

    Article Title: Increased mitochondrial activity in a novel IDH1-R132H mutant human oligodendroglioma xenograft model: in situ detection of 2-HG and α-KG
    Article Snippet: The slides were scanned at 3 μm resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted with Feature Extraction software (Agilent Technologies).

    Article Title: Kar4 is required for the normal pattern of meiotic gene expression.
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Over Expression:

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: New miRNA Profiles Accurately Distinguish Renal Cell Carcinomas and Upper Tract Urothelial Carcinomas from the Normal Kidney
    Article Snippet: After hybridization, the microarray slides were scanned at 10 μm using the High-Resolution Microarray Scanner (Agilent Technologies) and stored in an ozone free environment.

    Article Title: Tumor versus Stromal Cells in Culture—Survival of the Fittest?
    Article Snippet: The slides were scanned at 3 resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted using Feature Extraction (Agilent Technologies).

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations
    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Article Title: Single-Round Patterned DNA Library Microarray Aptamer Lead Identification
    Article Snippet: Microarray equipment consisted of the following: custom 8 × 15 k DNA microarrays, 8 × 15 k gasket slides, ozone barrier slides, hybridization chambers, scanner cassettes, hybridization oven, and High-resolution Microarray Scanner (all Agilent) and slide rack and wash dishes (Shandon) and Kimtech polypropylene wipes (Kimberly-Clark).

    Article Title: Increased mitochondrial activity in a novel IDH1-R132H mutant human oligodendroglioma xenograft model: in situ detection of 2-HG and α-KG
    Article Snippet: The slides were scanned at 3 μm resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted with Feature Extraction software (Agilent Technologies).

    Article Title: Kar4 is required for the normal pattern of meiotic gene expression.
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Standard Deviation:

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: New miRNA Profiles Accurately Distinguish Renal Cell Carcinomas and Upper Tract Urothelial Carcinomas from the Normal Kidney
    Article Snippet: After hybridization, the microarray slides were scanned at 10 μm using the High-Resolution Microarray Scanner (Agilent Technologies) and stored in an ozone free environment.

    Article Title: Tumor versus Stromal Cells in Culture—Survival of the Fittest?
    Article Snippet: The slides were scanned at 3 resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted using Feature Extraction (Agilent Technologies).

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations
    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Article Title: Single-Round Patterned DNA Library Microarray Aptamer Lead Identification
    Article Snippet: Microarray equipment consisted of the following: custom 8 × 15 k DNA microarrays, 8 × 15 k gasket slides, ozone barrier slides, hybridization chambers, scanner cassettes, hybridization oven, and High-resolution Microarray Scanner (all Agilent) and slide rack and wash dishes (Shandon) and Kimtech polypropylene wipes (Kimberly-Clark).

    Article Title: Increased mitochondrial activity in a novel IDH1-R132H mutant human oligodendroglioma xenograft model: in situ detection of 2-HG and α-KG
    Article Snippet: The slides were scanned at 3 μm resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted with Feature Extraction software (Agilent Technologies).

    Article Title: Kar4 is required for the normal pattern of meiotic gene expression.
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Hybridization:

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: New miRNA Profiles Accurately Distinguish Renal Cell Carcinomas and Upper Tract Urothelial Carcinomas from the Normal Kidney
    Article Snippet: After hybridization, the microarray slides were scanned at 10 μm using the High-Resolution Microarray Scanner (Agilent Technologies) and stored in an ozone free environment.

    Article Title: Tumor versus Stromal Cells in Culture—Survival of the Fittest?
    Article Snippet: The slides were scanned at 3 resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted using Feature Extraction (Agilent Technologies).

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations
    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Article Title: Single-Round Patterned DNA Library Microarray Aptamer Lead Identification
    Article Snippet: Microarray equipment consisted of the following: custom 8 × 15 k DNA microarrays, 8 × 15 k gasket slides, ozone barrier slides, hybridization chambers, scanner cassettes, hybridization oven, and High-resolution Microarray Scanner (all Agilent) and slide rack and wash dishes (Shandon) and Kimtech polypropylene wipes (Kimberly-Clark).

    Article Title: Increased mitochondrial activity in a novel IDH1-R132H mutant human oligodendroglioma xenograft model: in situ detection of 2-HG and α-KG
    Article Snippet: The slides were scanned at 3 μm resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted with Feature Extraction software (Agilent Technologies).

    Article Title: Kar4 is required for the normal pattern of meiotic gene expression.
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Negative Control:

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: New miRNA Profiles Accurately Distinguish Renal Cell Carcinomas and Upper Tract Urothelial Carcinomas from the Normal Kidney
    Article Snippet: After hybridization, the microarray slides were scanned at 10 μm using the High-Resolution Microarray Scanner (Agilent Technologies) and stored in an ozone free environment.

    Article Title: Tumor versus Stromal Cells in Culture—Survival of the Fittest?
    Article Snippet: The slides were scanned at 3 resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted using Feature Extraction (Agilent Technologies).

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations
    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Article Title: Single-Round Patterned DNA Library Microarray Aptamer Lead Identification
    Article Snippet: Microarray equipment consisted of the following: custom 8 × 15 k DNA microarrays, 8 × 15 k gasket slides, ozone barrier slides, hybridization chambers, scanner cassettes, hybridization oven, and High-resolution Microarray Scanner (all Agilent) and slide rack and wash dishes (Shandon) and Kimtech polypropylene wipes (Kimberly-Clark).

    Article Title: Increased mitochondrial activity in a novel IDH1-R132H mutant human oligodendroglioma xenograft model: in situ detection of 2-HG and α-KG
    Article Snippet: The slides were scanned at 3 μm resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted with Feature Extraction software (Agilent Technologies).

    Article Title: Kar4 is required for the normal pattern of meiotic gene expression.
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Fluorescence:

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: New miRNA Profiles Accurately Distinguish Renal Cell Carcinomas and Upper Tract Urothelial Carcinomas from the Normal Kidney
    Article Snippet: After hybridization, the microarray slides were scanned at 10 μm using the High-Resolution Microarray Scanner (Agilent Technologies) and stored in an ozone free environment.

    Article Title: Tumor versus Stromal Cells in Culture—Survival of the Fittest?
    Article Snippet: The slides were scanned at 3 resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted using Feature Extraction (Agilent Technologies).

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations
    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Article Title: Single-Round Patterned DNA Library Microarray Aptamer Lead Identification
    Article Snippet: Microarray equipment consisted of the following: custom 8 × 15 k DNA microarrays, 8 × 15 k gasket slides, ozone barrier slides, hybridization chambers, scanner cassettes, hybridization oven, and High-resolution Microarray Scanner (all Agilent) and slide rack and wash dishes (Shandon) and Kimtech polypropylene wipes (Kimberly-Clark).

    Article Title: Increased mitochondrial activity in a novel IDH1-R132H mutant human oligodendroglioma xenograft model: in situ detection of 2-HG and α-KG
    Article Snippet: The slides were scanned at 3 μm resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted with Feature Extraction software (Agilent Technologies).

    Article Title: Kar4 is required for the normal pattern of meiotic gene expression.
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Incubation:

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: New miRNA Profiles Accurately Distinguish Renal Cell Carcinomas and Upper Tract Urothelial Carcinomas from the Normal Kidney
    Article Snippet: After hybridization, the microarray slides were scanned at 10 μm using the High-Resolution Microarray Scanner (Agilent Technologies) and stored in an ozone free environment.

    Article Title: Tumor versus Stromal Cells in Culture—Survival of the Fittest?
    Article Snippet: The slides were scanned at 3 resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted using Feature Extraction (Agilent Technologies).

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations
    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Article Title: Single-Round Patterned DNA Library Microarray Aptamer Lead Identification
    Article Snippet: Microarray equipment consisted of the following: custom 8 × 15 k DNA microarrays, 8 × 15 k gasket slides, ozone barrier slides, hybridization chambers, scanner cassettes, hybridization oven, and High-resolution Microarray Scanner (all Agilent) and slide rack and wash dishes (Shandon) and Kimtech polypropylene wipes (Kimberly-Clark).

    Article Title: Increased mitochondrial activity in a novel IDH1-R132H mutant human oligodendroglioma xenograft model: in situ detection of 2-HG and α-KG
    Article Snippet: The slides were scanned at 3 μm resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted with Feature Extraction software (Agilent Technologies).

    Article Title: Kar4 is required for the normal pattern of meiotic gene expression.
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Software:

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: New miRNA Profiles Accurately Distinguish Renal Cell Carcinomas and Upper Tract Urothelial Carcinomas from the Normal Kidney
    Article Snippet: After hybridization, the microarray slides were scanned at 10 μm using the High-Resolution Microarray Scanner (Agilent Technologies) and stored in an ozone free environment.

    Article Title: Tumor versus Stromal Cells in Culture—Survival of the Fittest?
    Article Snippet: The slides were scanned at 3 resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted using Feature Extraction (Agilent Technologies).

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations
    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Article Title: Single-Round Patterned DNA Library Microarray Aptamer Lead Identification
    Article Snippet: Microarray equipment consisted of the following: custom 8 × 15 k DNA microarrays, 8 × 15 k gasket slides, ozone barrier slides, hybridization chambers, scanner cassettes, hybridization oven, and High-resolution Microarray Scanner (all Agilent) and slide rack and wash dishes (Shandon) and Kimtech polypropylene wipes (Kimberly-Clark).

    Article Title: Increased mitochondrial activity in a novel IDH1-R132H mutant human oligodendroglioma xenograft model: in situ detection of 2-HG and α-KG
    Article Snippet: The slides were scanned at 3 μm resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted with Feature Extraction software (Agilent Technologies).

    Article Title: Kar4 is required for the normal pattern of meiotic gene expression.
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Quantitative RT-PCR:

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: New miRNA Profiles Accurately Distinguish Renal Cell Carcinomas and Upper Tract Urothelial Carcinomas from the Normal Kidney
    Article Snippet: After hybridization, the microarray slides were scanned at 10 μm using the High-Resolution Microarray Scanner (Agilent Technologies) and stored in an ozone free environment.

    Article Title: Tumor versus Stromal Cells in Culture—Survival of the Fittest?
    Article Snippet: The slides were scanned at 3 resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted using Feature Extraction (Agilent Technologies).

    Article Title: Kar4 is Required for the Normal Pattern of Meiotic Gene Expression
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations
    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Article Title: Single-Round Patterned DNA Library Microarray Aptamer Lead Identification
    Article Snippet: Microarray equipment consisted of the following: custom 8 × 15 k DNA microarrays, 8 × 15 k gasket slides, ozone barrier slides, hybridization chambers, scanner cassettes, hybridization oven, and High-resolution Microarray Scanner (all Agilent) and slide rack and wash dishes (Shandon) and Kimtech polypropylene wipes (Kimberly-Clark).

    Article Title: Increased mitochondrial activity in a novel IDH1-R132H mutant human oligodendroglioma xenograft model: in situ detection of 2-HG and α-KG
    Article Snippet: The slides were scanned at 3 μm resolution using the Agilent High-Resolution Microarray scanner and the image data were extracted with Feature Extraction software (Agilent Technologies).

    Article Title: Kar4 is required for the normal pattern of meiotic gene expression.
    Article Snippet: Slides were scanned using the Agilent High-Resolution Microarray Scanner.



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    The 11 genes were detected in the <t>microarray</t> analysis and in the human dataset. A correlation between FCs of genes. B heatmap with hierarchical clustering of FCs of the 11 genes commonly detected in the murine neurospheres and AD patients’ tissues
    G2565ca High Resolution Laser Microarray Scanner, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/high-resolution+microarray+scanner/pmc11092345-332-15-20
    Average 90 stars, based on 1 article reviews
    g2565ca high-resolution laser microarray scanner - by Bioz Stars, 2026-09
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    Innopsys Inc innoscan 710 high- resolution microarray scanner
    The 11 genes were detected in the <t>microarray</t> analysis and in the human dataset. A correlation between FCs of genes. B heatmap with hierarchical clustering of FCs of the 11 genes commonly detected in the murine neurospheres and AD patients’ tissues
    Innoscan 710 High Resolution Microarray Scanner, supplied by Innopsys Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/high-resolution+microarray+scanner/innoscan+300+microarray+scanner/pm36977556-442-7-13
    Average 90 stars, based on 1 article reviews
    innoscan 710 high- resolution microarray scanner - by Bioz Stars, 2026-09
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    Flow chart of microarray data analysis. The agilent single color microarray platform was used having more than 58,000 transcripts and further data processing was done using agilent GeneSpring software followed by pathway analysis using GSEA database. Numbers in parentheses illustrates number of pathways enriched in each category using GSEA database. DEGs-Differentially expressed genes, ANOVA-Analysis of variance, BP-Biological pathway, CC-Cellular component, MF-Molecular function.

    Journal: bioRxiv

    Article Title: Synovial fluid transcriptome dynamics in osteoarthritis progression: Implications in pathogenesis

    doi: 10.1101/2024.06.24.600143

    Figure Lengend Snippet: Flow chart of microarray data analysis. The agilent single color microarray platform was used having more than 58,000 transcripts and further data processing was done using agilent GeneSpring software followed by pathway analysis using GSEA database. Numbers in parentheses illustrates number of pathways enriched in each category using GSEA database. DEGs-Differentially expressed genes, ANOVA-Analysis of variance, BP-Biological pathway, CC-Cellular component, MF-Molecular function.

    Article Snippet: Following hybridization, the array slides were washed and scanned with an Agilent SureScan High-Resolution DNA Microarray Scanner.

    Techniques: Microarray, Software

    The 11 genes were detected in the microarray analysis and in the human dataset. A correlation between FCs of genes. B heatmap with hierarchical clustering of FCs of the 11 genes commonly detected in the murine neurospheres and AD patients’ tissues

    Journal: Cell & Bioscience

    Article Title: Bradykinin promotes immune responses in differentiated embryonic neurospheres carrying APP swe and PS1 dE9 mutations

    doi: 10.1186/s13578-024-01251-3

    Figure Lengend Snippet: The 11 genes were detected in the microarray analysis and in the human dataset. A correlation between FCs of genes. B heatmap with hierarchical clustering of FCs of the 11 genes commonly detected in the murine neurospheres and AD patients’ tissues

    Article Snippet: The arrays were then washed as described on Agilent SSPE wash protocol v. 2.1 and scanned with a High-Resolution Microarray Scanner (Agilent Technologies).

    Techniques: Microarray